CDS

Accession Number TCMCG077C05624
gbkey CDS
Protein Id KAF5730880.1
Location complement(join(11683901..11683940,11685033..11685175,11685260..11685350,11686474..11686616,11686697..11687137,11687893..11688432))
Organism Tripterygium wilfordii
locus_tag HS088_TW19G00482

Protein

Length 465aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000019.1
Definition Histone deacetylase 6 isoform 1 [Tripterygium wilfordii]
Locus_tag HS088_TW19G00482

EGGNOG-MAPPER Annotation

COG_category B
Description Belongs to the histone deacetylase family. HD Type 1 subfamily
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K06067        [VIEW IN KEGG]
EC 3.5.1.98        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04213        [VIEW IN KEGG]
ko04330        [VIEW IN KEGG]
ko04919        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05034        [VIEW IN KEGG]
ko05165        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
ko05220        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04213        [VIEW IN KEGG]
map04330        [VIEW IN KEGG]
map04919        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05034        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
map05220        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004407        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010431        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016575        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016810        [VIEW IN EMBL-EBI]
GO:0016811        [VIEW IN EMBL-EBI]
GO:0019213        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0033558        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGACGACACCGCGGGCGCATCACTTCCTTCTGGTCCGGACGCGACGAAGAGGCGAGTAACCTACTTCTACGAACCGTCTATCGGAGACTACTACTACGGACAAGGCCACCCGATGAAGCCTCACCGGATCCGGATGGCCCATAACCTAATCGTCCACTACTCTCTTCACCGTCGCATGGAGATCAACCGACCCTTTCCTGCCGGCGCCAATGACATCCGCCGCTTCCATACCGACGAATATGTTCAGTTCCTTCGATCCGTCAGTCCTGATGTCCTAGCCGAACCCTCCTTCAACCGATCTCAAAAGCGTTTTAATGTCGGTGAGGACTGCCCTGTCTTTGAAGGCCTCTTCAACTTCTGCCAGGCTTCCGCTGGAGGTTCCATTGGTGCTGCGGTCAAGCTTAATCGAGGTGATGCCGATATTGCGCTCAATTGGGCTGGTGGCCTGCACCATGCCAAGAAGAGCGAGGCGTCCGGGTTCTGTTATGTCAATGATATTGTACTGGGAATTCTTGAGTTGCTCAAGGTTCACAGGCGGGTAATCTACGTAGATATTGATGTCCACCATGGAGATGGCGTCGAGGAGGCATTTTATACCACCGACAGAGTCATGACAGTCTCTTTTCATAAGTATGGGGATTACTTTCCTGGCACCGGGCATATTAGGGACACTGGGGCGGGACTTGGGCAGAACTATGCACTGAATGTCCCACTGAATGATGGGATGGATGATGTAAGCTTCCGTAGTTTGTTTCGGCCTATAATCCAAAAAGCTATGGAAATATATCAGCCAGATGCTGTTGTTCTTCAATGCGGAGCTGATTCATTGGCAGGCGACAGGTTGGGGGATTTCAACTTGTCCGTGAAGGGTCATGCAGATTGCCTTCGTTTTCTTAGATCTTTCAATGTACCTTTGATGATCTTGGGTGGTGGAGGGTACACCATTCGCAATGTTGCCCGTTGCTGGTGCTACGAGACGGCGGTTGCAGTTGGCGTGGAGCCTGATAATAAATTGCCATATAATGAATATTATGAATATTTTGGCCCAGATTATAATCTTCACATTGTACCAAGCAACATGGAGAACCTTAATGCACCCGAAGATATGGACAGGATAAGGAATGTGCTACTTGAGCAACTCTCAAACCTATCTCATGCCCCCAGTGTACCTTTTCAGACAACACCTCGAACTGCACAAGCTCCAGAAGAGGCAGAGGAGGACATAGATCGAAGACCTAAACCTCGTATTTGGAATGGGGATGATTTAGAGTCTGATAATGACGATGATGCAATTGATCCTCAATACAGAACCTCAAGCACTGATAATCAAACTTCAGTAAACACTGAGATGAGGGATGTTGTGGATGAAATGGATGAAGAGAAAACAGACTAG
Protein:  
MDDDTAGASLPSGPDATKRRVTYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAGANDIRRFHTDEYVQFLRSVSPDVLAEPSFNRSQKRFNVGEDCPVFEGLFNFCQASAGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVIYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDYFPGTGHIRDTGAGLGQNYALNVPLNDGMDDVSFRSLFRPIIQKAMEIYQPDAVVLQCGADSLAGDRLGDFNLSVKGHADCLRFLRSFNVPLMILGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYNLHIVPSNMENLNAPEDMDRIRNVLLEQLSNLSHAPSVPFQTTPRTAQAPEEAEEDIDRRPKPRIWNGDDLESDNDDDAIDPQYRTSSTDNQTSVNTEMRDVVDEMDEEKTD